CDS

Accession Number TCMCG066C11546
gbkey CDS
Protein Id XP_034587501.1
Location join(12695016..12695545,12695790..12695901,12696649..12696987)
Gene LOC117849880
GeneID 117849880
Organism Setaria viridis

Protein

Length 326aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034731610.1
Definition nuclear pore complex protein NUP35 isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category D
Description Nup53/35/40-type RNA recognition motif
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14313        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006607        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044613        [VIEW IN EMBL-EBI]
GO:0044615        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCTCCCCCTCCCGCTCCCCCGCCGCCGCCCGCCGCGGCCGCAGCGCGCGGCAGTCCCCCTTCTTCCGCGACCTCGCCTCCCCGATCCCGTCCCACCGCGGCGCCTCTCGCTTCGCGTCGTCCGCGTCCACCGCCGCGGCCCCCTCCGCGACGCCACCGCCGCCGCCCATCTTCACCCTCGACGACCGCTACGCCTCCGCGGACTTCTCCCCGGACCCCACCGCCTCCGACCTCCTCCCCGTGGCCTCGTCCCCGTCCCCGCGCGCCGCCGCCAGCCGCTCGCCGTCATGGGACCGGTCCCGGGGCAGGGTGGCGCTCTCGGCACCGGGATCCCCCATGGATGGGGTCGTGGAGCCGGCCCGGAAGGAGGTGCTCGCACTGCCTCCGCCTGCGAGCCCTGGCACCCCACCTCTTGCTACCACAGCGGAGGCGCAGTCGTCTGTGACCCCCGCACAGGCACCGGTTAGGACGGAGCCGGTGGCGAACGGAGGGGAGGCGGAACGGGAGGAGTGGGTCACAGTATTCGGATTCTCTATTGGAGATACCAACCTTGTTCTTCGGGAATTCGAGAAATGTGGAGTAATATTGAGACACCACTCTGGTCCAAGAGATGGTAACTGGATTCACATATTGTACCAGCGCTCGTACGACGCTCGGAAGGCCCTCCAGAAAAATGGTATCCAACTAAGCAGTGGGCTCATAGTTGGAGTAAAGCCTATTGATCCAGTGCATCGTCAGCAGCTGGATCAGAGGTTAATTGGAAGCAACCAAGGAGGTTTTATGGTTTCCTTGCCTTCAAAGTCACTTGCCTTGAAGAGCACAGGCGCATCGAACCAGCTAGGAGCTTTGCCCCGCCCATATGACCCGAAGGCTAACACAAATGTTAACCGAGATGCAGGCCGTCGTGCAACCGGCAGTGTTGCTGCACCCGCAAAATCAATTGTAACCAATGTGATGGATTTGATATTCGGCATTTGA
Protein:  
MASPSRSPAAARRGRSARQSPFFRDLASPIPSHRGASRFASSASTAAAPSATPPPPPIFTLDDRYASADFSPDPTASDLLPVASSPSPRAAASRSPSWDRSRGRVALSAPGSPMDGVVEPARKEVLALPPPASPGTPPLATTAEAQSSVTPAQAPVRTEPVANGGEAEREEWVTVFGFSIGDTNLVLREFEKCGVILRHHSGPRDGNWIHILYQRSYDARKALQKNGIQLSSGLIVGVKPIDPVHRQQLDQRLIGSNQGGFMVSLPSKSLALKSTGASNQLGALPRPYDPKANTNVNRDAGRRATGSVAAPAKSIVTNVMDLIFGI